Publications

1: Nordman JT, Orr-Weaver TL. Understanding replication fork progression,stability, and chromosome fragility by exploiting the Suppressor ofUnderreplication protein. Bioessays. 2015 Aug;37(8):856-61. doi:10.1002/bies.201500021. Epub 2015 Jun 9. PubMed PMID: 26059810; PubMed CentralPMCID: PMC4556369.

2: Nordman JT, Kozhevnikova EN, Verrijzer CP, Pindyurin AV, Andreyeva EN, Shloma VV, Zhimulev IF, Orr-Weaver TL. DNA copy-number control through inhibition ofreplication fork progression. Cell Rep. 2014 Nov 6;9(3):841-9. doi:10.1016/j.celrep.2014.10.005. Epub 2014 Oct 30. PubMed PMID: 25437540; PubMedCentral PMCID: PMC4366648.

3: Nordman J, Orr-Weaver TL. Regulation of DNA replication during development.Development. 2012 Feb;139(3):455-64. doi: 10.1242/dev.061838. Review. PubMedPMID: 22223677; PubMed Central PMCID: PMC3252349.

4: Sher N, Bell GW, Li S, Nordman J, Eng T, Eaton ML, Macalpine DM, Orr-WeaverTL. Developmental control of gene copy number by repression of replicationinitiation and fork progression. Genome Res. 2012 Jan;22(1):64-75. doi:10.1101/gr.126003.111. Epub 2011 Nov 16. PubMed PMID: 22090375; PubMed CentralPMCID: PMC3246207.

5: Nordman J, Wright A. Escherichia coli nucleoside diphosphate kinase mutantsdepend on translesion DNA synthesis to prevent mutagenesis. J Bacteriol. 2011Sep;193(17):4531-3. doi: 10.1128/JB.05393-11. Epub 2011 Jul 1. PubMed PMID:21725024; PubMed Central PMCID: PMC3165513.

6: Kim JC, Nordman J, Xie F, Kashevsky H, Eng T, Li S, MacAlpine DM, Orr-WeaverTL. Integrative analysis of gene amplification in Drosophila follicle cells:parameters of origin activation and repression. Genes Dev. 2011 Jul1;25(13):1384-98. doi: 10.1101/gad.2043111. PubMed PMID: 21724831; PubMed CentralPMCID: PMC3134082.

7: modENCODE Consortium, Roy S, Ernst J, Kharchenko PV, Kheradpour P, Negre N,Eaton ML, Landolin JM, Bristow CA, Ma L, Lin MF, Washietl S, Arshinoff BI, Ay F, Meyer PE, Robine N, Washington NL, Di Stefano L, Berezikov E, Brown CD, Candeias R, Carlson JW, Carr A, Jungreis I, Marbach D, Sealfon R, Tolstorukov MY, Will S, Alekseyenko AA, Artieri C, Booth BW, Brooks AN, Dai Q, Davis CA, Duff MO, Feng X,Gorchakov AA, Gu T, Henikoff JG, Kapranov P, Li R, MacAlpine HK, Malone J, MinodaA, Nordman J, Okamura K, Perry M, Powell SK, Riddle NC, Sakai A, Samsonova A,Sandler JE, Schwartz YB, Sher N, Spokony R, Sturgill D, van Baren M, Wan KH, YangL, Yu C, Feingold E, Good P, Guyer M, Lowdon R, Ahmad K, Andrews J, Berger B,Brenner SE, Brent MR, Cherbas L, Elgin SC, Gingeras TR, Grossman R, Hoskins RA,Kaufman TC, Kent W, Kuroda MI, Orr-Weaver T, Perrimon N, Pirrotta V, Posakony JW,Ren B, Russell S, Cherbas P, Graveley BR, Lewis S, Micklem G, Oliver B, Park PJ, Celniker SE, Henikoff S, Karpen GH, Lai EC, MacAlpine DM, Stein LD, White KP,Kellis M. Identification of functional elements and regulatory circuits byDrosophila modENCODE. Science. 2010 Dec 24;330(6012):1787-97. doi:10.1126/science.1198374. Epub 2010 Dec 22. PubMed PMID: 21177974; PubMed Central PMCID: PMC3192495.

8: Nordman J, Li S, Eng T, Macalpine D, Orr-Weaver TL. Developmental control ofthe DNA replication and transcription programs. Genome Res. 2011Feb;21(2):175-81. doi: 10.1101/gr.114611.110. Epub 2010 Dec 22. PubMed PMID:21177957; PubMed Central PMCID: PMC3032921.

9: Nordman J, Wright A. The relationship between dNTP pool levels and mutagenesisin an Escherichia coli NDP kinase mutant. Proc Natl Acad Sci U S A. 2008 Jul22;105(29):10197-202. doi: 10.1073/pnas.0802816105. Epub 2008 Jul 10. PubMedPMID: 18621712; PubMed Central PMCID: PMC2453072.

10: Dineen SS, Villapakkam AC, Nordman JT, Sonenshein AL. Repression ofClostridium difficile toxin gene expression by CodY. Mol Microbiol. 2007Oct;66(1):206-19. Epub 2007 Aug 28. PubMed PMID: 17725558.

11: Nordman J, Skovgaard O, Wright A. A novel class of mutations that affect DNA replication in E. coli. Mol Microbiol. 2007 Apr;64(1):125-38. PubMed PMID:17376077.

12: Renzette N, Gumlaw N, Nordman JT, Krieger M, Yeh SP, Long E, Centore R,Boonsombat R, Sandler SJ. Localization of RecA in Escherichia coli K-12 usingRecA-GFP. Mol Microbiol. 2005 Aug;57(4):1074-85. PubMed PMID: 16091045.

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