{"id":266,"date":"2013-03-02T11:45:24","date_gmt":"2013-03-02T16:45:24","guid":{"rendered":"https:\/\/my.vanderbilt.edu\/masi\/?p=266"},"modified":"2016-10-31T11:55:24","modified_gmt":"2016-10-31T16:55:24","slug":"assessment-of-bias-in-mri-diffusion-tensor-imaging-parameters-using-simex","status":"publish","type":"post","link":"https:\/\/my.vanderbilt.edu\/masi\/2013\/03\/assessment-of-bias-in-mri-diffusion-tensor-imaging-parameters-using-simex\/","title":{"rendered":"Assessment of Bias in MRI Diffusion Tensor Imaging Parameters Using SIMEX"},"content":{"rendered":"<p>Carolyn B. Lauzon, Ciprian Crainiceanu, Brian C. Caffo, Bennett A. Landman, \u201cAssessment of Bias in MRI Diffusion Tensor Imaging Parameters Using SIMEX\u201d, Magnetic Resonance in Medicine. 2013 Mar 1;69(3):891-902. PMC22611000 \u2020<\/p>\n<p><strong>Full Text:<\/strong> <a href=\"https:\/\/www.ncbi.nlm.nih.gov\/pubmed\/22611000\">https:\/\/www.ncbi.nlm.nih.gov\/pubmed\/22611000<\/a><\/p>\n<h2>Abstract:<\/h2>\n<p><span class=\"highlight\">Diffusion<\/span> <span class=\"highlight\">tensor<\/span> <span class=\"highlight\">imaging<\/span> enables in vivo investigation of tissue cytoarchitecture through parameter contrasts sensitive to water <span class=\"highlight\">diffusion<\/span> barriers at the micrometer level. <span class=\"highlight\">Parameters<\/span> are derived through an estimation process that is susceptible to noise and artifacts. Estimated <span class=\"highlight\">parameters<\/span> (e.g., fractional anisotropy) exhibit both variability and <span class=\"highlight\">bias<\/span> relative to the true parameter value estimated from a hypothetical noise-free acquisition. Herein, we present the use of the simulation and extrapolation (<span class=\"highlight\">SIMEX<\/span>) approach for post hoc <span class=\"highlight\">assessment<\/span> of <span class=\"highlight\">bias<\/span> in a massively univariate <span class=\"highlight\">imaging<\/span> setting and evaluate the potential of a <span class=\"highlight\">SIMEX<\/span>-based <span class=\"highlight\">bias<\/span> correction. Using simulated data with known truth models, spatially varying fractional anisotropy <span class=\"highlight\">bias<\/span> error maps are evaluated on two independent and highly differentiated case studies. The stability of <span class=\"highlight\">SIMEX<\/span> and its distributional properties are further evaluated on 42 empirical <span class=\"highlight\">diffusion<\/span> <span class=\"highlight\">tensor<\/span> <span class=\"highlight\">imaging<\/span> datasets. Using gradient subsampling, an empirical experiment with a known true outcome is designed and <span class=\"highlight\">SIMEX<\/span> performance is compared to the original estimator. With this approach, we find <span class=\"highlight\">SIMEX<\/span> <span class=\"highlight\">bias<\/span> estimates to be highly accurate offering significant reductions in parameter <span class=\"highlight\">bias<\/span> for individual datasets and greater accuracy in averaged population-based estimates.<img loading=\"lazy\" decoding=\"async\" class=\"alignnone wp-image-280\" src=\"https:\/\/my.vanderbilt.edu\/masi\/wp-content\/uploads\/sites\/2304\n2661\/2016\/10\/nihms531393f4-1.jpg\" alt=\"Print\" width=\"500\" height=\"471\" \/><\/p>\n","protected":false},"excerpt":{"rendered":"<p>Carolyn B. Lauzon, Ciprian Crainiceanu, Brian C. Caffo, Bennett A. Landman, \u201cAssessment of Bias in MRI Diffusion Tensor Imaging Parameters Using SIMEX\u201d, Magnetic Resonance in Medicine. 2013 Mar 1;69(3):891-902. PMC22611000 \u2020 Full Text: https:\/\/www.ncbi.nlm.nih.gov\/pubmed\/22611000 Abstract: Diffusion tensor imaging enables in vivo investigation of tissue cytoarchitecture through parameter contrasts sensitive to water diffusion barriers at the&#8230;<\/p>\n","protected":false},"author":6299,"featured_media":280,"comment_status":"closed","ping_status":"closed","sticky":false,"template":"","format":"standard","meta":{"footnotes":""},"categories":[33,4],"tags":[34,11,35],"class_list":["post-266","post","type-post","status-publish","format-standard","has-post-thumbnail","hentry","category-diffusion-tensor-imaging","category-neuroimaging","tag-diffusion-tensor-imaging","tag-dti","tag-neuroimaging"],"_links":{"self":[{"href":"https:\/\/my.vanderbilt.edu\/masi\/wp-json\/wp\/v2\/posts\/266","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/my.vanderbilt.edu\/masi\/wp-json\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/my.vanderbilt.edu\/masi\/wp-json\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/my.vanderbilt.edu\/masi\/wp-json\/wp\/v2\/users\/6299"}],"replies":[{"embeddable":true,"href":"https:\/\/my.vanderbilt.edu\/masi\/wp-json\/wp\/v2\/comments?post=266"}],"version-history":[{"count":1,"href":"https:\/\/my.vanderbilt.edu\/masi\/wp-json\/wp\/v2\/posts\/266\/revisions"}],"predecessor-version":[{"id":301,"href":"https:\/\/my.vanderbilt.edu\/masi\/wp-json\/wp\/v2\/posts\/266\/revisions\/301"}],"wp:featuredmedia":[{"embeddable":true,"href":"https:\/\/my.vanderbilt.edu\/masi\/wp-json\/wp\/v2\/media\/280"}],"wp:attachment":[{"href":"https:\/\/my.vanderbilt.edu\/masi\/wp-json\/wp\/v2\/media?parent=266"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/my.vanderbilt.edu\/masi\/wp-json\/wp\/v2\/categories?post=266"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/my.vanderbilt.edu\/masi\/wp-json\/wp\/v2\/tags?post=266"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}