{"id":6,"date":"2012-08-10T15:50:29","date_gmt":"2012-08-10T15:50:29","guid":{"rendered":"https:\/\/my.vanderbilt.edu\/williamfrench\/publications\/"},"modified":"2013-05-01T12:16:47","modified_gmt":"2013-05-01T17:16:47","slug":"researchhighlights","status":"publish","type":"page","link":"https:\/\/my.vanderbilt.edu\/williamfrench\/researchhighlights\/","title":{"rendered":"Research Highlights"},"content":{"rendered":"<p><span style=\"font-family: 'Gill Sans';font-size: x-large\"><span style=\"font-size: 22px\"><span style=\"font-family: 'Gill Sans';font-size: x-large\"><span style=\"font-size: 24px\"><span style=\"text-decoration: underline\">Gold-Benzenedithiolate-Gold Molecular Transport Junctions<\/span><\/span><\/span><\/span><\/span><\/p>\n<p><span style=\"font-family: 'Gill Sans'\"><span style=\"font-size: medium\"><span style=\"font-size: 15px\">In <a title=\"this article\" href=\"http:\/\/pubs.acs.org\/doi\/abs\/10.1021\/nn300276m\" target=\"_blank\">this article<\/a>, we employed a hybrid molecular dynamics-Monte Carlo simulation scheme to study the impact of monolayer density, tip geometry, and temperature on the number, tilt angle, and bonding geometry of molecular junctions consisting of benzene-1,4-dithiolate (BDT) molecules chemically attached between gold nanotips. \u00a0We found that monolayer density is an important determinant of the number of bridged molecules, with low monolayer density favoring the formation of multimolecule junctions and single-molecule junctions occurring most often at high monolayer density. \u00a0We also showed that tip geometry and the presence of a monolayer, two factors often ignored in simulation, can have drastic effects on the structure of bridged molecules.<\/span><\/span><br \/>\n<\/span><\/p>\n<div id=\"attachment_29\" style=\"width: 459px\" class=\"wp-caption aligncenter\"><a href=\"https:\/\/cdn.vanderbilt.edu\/t2-my\/my-prd\/wp-content\/uploads\/sites\/619\/2012\/08\/mcbj.jpg\"><span style=\"font-family: 'Gill Sans'\"><img loading=\"lazy\" decoding=\"async\" aria-describedby=\"caption-attachment-29\" class=\"size-large wp-image-29    \" src=\"https:\/\/cdn.vanderbilt.edu\/t2-my\/my-prd\/wp-content\/uploads\/sites\/619\/2012\/08\/mcbj-650x418.jpg\" alt=\"\" width=\"449\" height=\"288\" srcset=\"https:\/\/cdn.vanderbilt.edu\/t2-my\/my-prd\/wp-content\/uploads\/sites\/619\/2012\/08\/mcbj-650x418.jpg 650w, https:\/\/cdn.vanderbilt.edu\/t2-my\/my-prd\/wp-content\/uploads\/sites\/619\/2012\/08\/mcbj-300x193.jpg 300w, https:\/\/cdn.vanderbilt.edu\/t2-my\/my-prd\/wp-content\/uploads\/sites\/619\/2012\/08\/mcbj.jpg 1321w\" sizes=\"auto, (max-width: 449px) 100vw, 449px\" \/><\/span><\/a><p id=\"caption-attachment-29\" class=\"wp-caption-text\">(a) BDT self-assembles onto an unstretched gold nanowire; a closeup is shown in (b). (c) Gold point contact in the necked region of the nanowire as a result of elongation. (d) Following nanowire rupture, the bulk BDT is evaporated from the simulation box. (e) The ruptured NW tips are brought together, resulting in the formation of a molecular junction.<\/p><\/div>\n<p><span style=\"font-family: 'Gill Sans'\"><span style=\"font-size: medium\"><span style=\"font-size: 15px\">In <a title=\"this letter\" href=\"http:\/\/pubs.rsc.org\/en\/Content\/ArticleLanding\/2013\/NR\/c3nr00459g\" target=\"_blank\">this letter<\/a>, we investigated Au-BDT-Au junctions under elongation (i.e., break-junction simulations), calculating the conductance of the simulated junctions for direct comparison to experiment. In doing so we identified important structure-conductance relationships for these systems. Specifically, we showed that the formation of monatomic chains of Au atoms directly connected to BDT results in counterintuitive conductance increases during elongation. This result provides a detailed explanation for a poorly understood experimental mechanism, and may lead to improved control over mechanically responsive molecular devices.<\/span><\/span><\/span><\/p>\n<div id=\"attachment_88\" style=\"width: 385px\" class=\"wp-caption aligncenter\"><a href=\"https:\/\/cdn.vanderbilt.edu\/t2-my\/my-prd\/wp-content\/uploads\/sites\/619\/2012\/08\/histograms.jpg\"><img loading=\"lazy\" decoding=\"async\" aria-describedby=\"caption-attachment-88\" class=\"size-large wp-image-88  \" src=\"https:\/\/cdn.vanderbilt.edu\/t2-my\/my-prd\/wp-content\/uploads\/sites\/619\/2012\/08\/histograms-650x577.jpg\" alt=\"\" width=\"375\" height=\"393\" \/><\/a><p id=\"caption-attachment-88\" class=\"wp-caption-text\">Conductance histograms of three thermally evolving Au-BDT-Au junctions. The right-most (light blue) histogram corresponds to a system with a monatomic chain, where negligible overlap with histograms for two other junctions is observed. The bin width is 0.006. Standard deviations of the histograms (from left to right) are 0.014, 0.018, and 0.034.<\/p><\/div>\n<p><span style=\"font-family: 'Gill Sans'\"><span style=\"font-size: medium\"><span style=\"font-size: 15px\">In a <a title=\"related letter\" href=\"http:\/\/pubs.acs.org\/doi\/abs\/10.1021\/jz4001104\" target=\"_blank\">related letter<\/a>, we investigated the structural origins of conductance fluctuations in Au-BDT-Au junctions. Conductance fluctuations are a major barrier to the construction of reliable molecular circuitry. Improving our understanding of the source of these fluctuations may enable the development of new strategies for limiting the magnitude of the fluctuations. We showed that structurally non-ideal junctions (i.e., those that have been stretched and deformed) exhibit larger conductance fluctuations than structurally ideal junctions. This result has important implications for break-junction experiments, where junction deformation may give rise to unacceptable structural changes that significantly alter the conductance behavior of the junction. Our findings also highlight the importance of incorporating realistic structural detail into theoretical calculations of molecular conductance.<\/span><\/span><\/span><\/p>\n<p style=\"text-align: center\"><span style=\"font-family: 'Gill Sans'\"><span style=\"font-size: medium\"><span style=\"font-size: 15px\"> <\/span><\/span><\/span><\/p>\n<div id=\"attachment_90\" style=\"width: 457px\" class=\"wp-caption aligncenter\"><a href=\"https:\/\/cdn.vanderbilt.edu\/t2-my\/my-prd\/wp-content\/uploads\/sites\/619\/2012\/08\/elongation.jpg\"><img loading=\"lazy\" decoding=\"async\" aria-describedby=\"caption-attachment-90\" class=\"size-large wp-image-90 \" src=\"https:\/\/cdn.vanderbilt.edu\/t2-my\/my-prd\/wp-content\/uploads\/sites\/619\/2012\/08\/elongation-638x650.jpg\" alt=\"\" width=\"447\" height=\"455\" srcset=\"https:\/\/cdn.vanderbilt.edu\/t2-my\/my-prd\/wp-content\/uploads\/sites\/619\/2012\/08\/elongation-638x650.jpg 638w, https:\/\/cdn.vanderbilt.edu\/t2-my\/my-prd\/wp-content\/uploads\/sites\/619\/2012\/08\/elongation-294x300.jpg 294w\" sizes=\"auto, (max-width: 447px) 100vw, 447px\" \/><\/a><p id=\"caption-attachment-90\" class=\"wp-caption-text\">(Top) Thermally averaged and single-geometry conductance trace for Au-BDT-Au junction undergoing elongation. The initial junction geometries are shown above for every angstrom of elongation. (Bottom) Plot showing the root-mean-square deviation (the average value between the two tips) of the Au atom bonded to BDT.<\/p><\/div>\n<p>&nbsp;<\/p>\n<dd> <\/dd>\n<dd> <\/dd>\n<dd><span style=\"text-decoration: underline\"><span style=\"font-family: 'Gill Sans';font-size: x-large\"><span style=\"font-size: 24px\"><span style=\"font-family: 'Gill Sans'\">Gold Nanowires Elongated in Adsorbate<\/span><\/span><\/span><\/span><\/dd>\n<dd><span style=\"font-family: 'Gill Sans'\"><span style=\"font-weight: normal\"><span style=\"font-family: 'Gill Sans'\"><br \/>\n<\/span> <\/span><\/span><\/dd>\n<dd><span style=\"font-size: medium\"><span style=\"font-size: 15px\"><span style=\"font-family: 'Gill Sans'\">In <\/span><\/span><\/span><a title=\"this article\" href=\"http:\/\/pubs.acs.org\/doi\/abs\/10.1021\/jp203837r\" target=\"_blank\"><span style=\"font-size: medium\"><span style=\"font-size: 15px\"><span style=\"font-family: 'Gill Sans'\">this article<\/span><\/span><\/span><\/a><span style=\"font-size: medium\"><span style=\"font-size: 15px\"><span style=\"font-family: 'Gill Sans'\">, we investigated the impact of molecular adsorption on the mechanical and structural evolution of elongating gold nanowires. \u00a0We found that adsorbates that interact strongly with the wire can stabilize high-energy structural motifs, effectively enhancing the mechanical properties of the nanowires. \u00a0In contrast, an adsorbate that interacts weakly with the wire can adversely affect the mechanical properties of the wire. These results are important in experiments involving the deformation of metallic materials in the presence of an adsorbate, where controlling the mechanical and structural properties of the materials is desirable<\/span><\/span><\/span><strong><span style=\"font-size: medium\"><span style=\"font-size: 15px\"><span style=\"font-family: 'Gill Sans'\"><span style=\"font-weight: normal\">.<\/span><\/span><\/span><\/span><span style=\"font-family: 'Gill Sans'\"><span style=\"font-weight: normal\"> <\/span><\/span> <\/strong>&nbsp;<\/p>\n<p><strong> <\/strong><\/p>\n<p><strong> <\/strong><\/p>\n<p><strong> <\/strong><\/p>\n<p><strong> <\/strong><\/p>\n<p><strong> <\/strong><\/p>\n<p><strong><\/p>\n<div id=\"attachment_50\" style=\"width: 436px\" class=\"wp-caption aligncenter\"><a href=\"https:\/\/cdn.vanderbilt.edu\/t2-my\/my-prd\/wp-content\/uploads\/sites\/619\/2012\/08\/pe1.jpg\"><span style=\"font-family: 'Gill Sans'\"><span style=\"font-weight: normal\"><span style=\"font-family: 'Gill Sans'\"><img loading=\"lazy\" decoding=\"async\" aria-describedby=\"caption-attachment-50\" class=\"size-large wp-image-50    \" src=\"https:\/\/cdn.vanderbilt.edu\/t2-my\/my-prd\/wp-content\/uploads\/sites\/619\/2012\/08\/pe1-650x475.jpg\" alt=\"\" width=\"426\" height=\"312\" srcset=\"https:\/\/cdn.vanderbilt.edu\/t2-my\/my-prd\/wp-content\/uploads\/sites\/619\/2012\/08\/pe1-650x475.jpg 650w, https:\/\/cdn.vanderbilt.edu\/t2-my\/my-prd\/wp-content\/uploads\/sites\/619\/2012\/08\/pe1-300x219.jpg 300w, https:\/\/cdn.vanderbilt.edu\/t2-my\/my-prd\/wp-content\/uploads\/sites\/619\/2012\/08\/pe1.jpg 890w\" sizes=\"auto, (max-width: 426px) 100vw, 426px\" \/><\/span><\/span><\/span><\/a><p id=\"caption-attachment-50\" class=\"wp-caption-text\">(Top Curve) The average potential energy acting on each Au atom in vacuum.  (Bottom Curve) The average potential energy acting on each Au atom, including the contribution of both the Au-Au and adsorbate-Au interactions.<\/p><\/div>\n<p><\/strong><strong> <\/strong><strong> <\/strong><strong> <\/strong><strong> <\/strong><strong> <\/strong><strong> <\/strong><strong> <\/strong><strong> <\/strong><strong> <\/strong><\/p>\n<\/dd>\n<dd> <\/dd>\n<dd><strong><br \/>\n<\/strong><\/dd>\n<p>&nbsp;<\/p>\n","protected":false},"excerpt":{"rendered":"<p>Gold-Benzenedithiolate-Gold Molecular Transport Junctions In this article, we employed a hybrid molecular dynamics-Monte Carlo simulation scheme to study the impact of monolayer density, tip geometry, and temperature on the number, tilt angle, and bonding geometry of molecular junctions consisting of benzene-1,4-dithiolate (BDT) molecules chemically attached between gold nanotips. \u00a0We found that monolayer density is an&#8230;<\/p>\n","protected":false},"author":907,"featured_media":0,"parent":0,"menu_order":0,"comment_status":"open","ping_status":"open","template":"page-blog.php","meta":{"footnotes":""},"tags":[],"class_list":["post-6","page","type-page","status-publish","hentry"],"_links":{"self":[{"href":"https:\/\/my.vanderbilt.edu\/williamfrench\/wp-json\/wp\/v2\/pages\/6","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/my.vanderbilt.edu\/williamfrench\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/my.vanderbilt.edu\/williamfrench\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/my.vanderbilt.edu\/williamfrench\/wp-json\/wp\/v2\/users\/907"}],"replies":[{"embeddable":true,"href":"https:\/\/my.vanderbilt.edu\/williamfrench\/wp-json\/wp\/v2\/comments?post=6"}],"version-history":[{"count":42,"href":"https:\/\/my.vanderbilt.edu\/williamfrench\/wp-json\/wp\/v2\/pages\/6\/revisions"}],"predecessor-version":[{"id":104,"href":"https:\/\/my.vanderbilt.edu\/williamfrench\/wp-json\/wp\/v2\/pages\/6\/revisions\/104"}],"wp:attachment":[{"href":"https:\/\/my.vanderbilt.edu\/williamfrench\/wp-json\/wp\/v2\/media?parent=6"}],"wp:term":[{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/my.vanderbilt.edu\/williamfrench\/wp-json\/wp\/v2\/tags?post=6"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}