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Recent Protocol Updates
- Cortical Associated White Matter Frontal Lobe (fl) April 20, 2018
- Cortical Associated White Matter Occipital Lobe (ol) April 20, 2018
- Uncinate Fasciculus (unc) April 20, 2018
- Cortical Associated White Matter Temporal Lobe (tl) April 20, 2018
- Tapetum of the Corpus Callosum (tap) April 20, 2018
Bookkeeping
Author Archives: Bennett Landman
Cortical Associated White Matter Frontal Lobe (fl)
Protocol PDF Document (version 1.2): fl Instructions: Load the unique frontal lobe mask generated by a multi-atlas segmentation algorithm applied to the subject’s native space T1 image Set the tracking parameters max length(mm) to 150.0 Copy the left and right mask … Continue reading
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813 Comments
Cortical Associated White Matter Occipital Lobe (ol)
Protocol PDF Document (version 1.2): ol Instructions: Load the unique frontal lobe mask generated by a multi-atlas segmentation algorithm applied to the subject’s native space T1 image Set the tracking parameters max length(mm) to 150.0 Copy the left and right mask … Continue reading
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623 Comments
Uncinate Fasciculus (unc)
Protocol PDF Document (version 1.2): unc Instructions: Create two separate axial seed regions (at approx. axial slice 56), one for each side. Create one ROA region and draw two sagittal ROA slice near the midline – medial to the left seed (at … Continue reading
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616 Comments
Cortical Associated White Matter Temporal Lobe (tl)
Protocol PDF Document (version 1.2): tl Instructions: Load the unique frontal lobe mask generated by a multi-atlas segmentation algorithm applied to the subject’s native space T1 image Set the tracking parameters max length(mm) to 150.0 Copy the left and right mask … Continue reading
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602 Comments
Tapetum of the Corpus Callosum (tap)
Protocol PDF Document (version 1.2): tap Instructions: Create two separate axial regions (at approx. axial slice 82), one for each side – select one as a seed and the other as a ROI. Then run fiber tracking. Based on this output, … Continue reading
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755 Comments
Sagittal Stratum (ss)
Protocol PDF Document (version 1.2): ss Instructions: Create two separate axial seed regions (at approx. axial slice 64), one for each side. Create one ROA region and draw a sagittal ROA slice at the midline In the region list, check only the left … Continue reading
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630 Comments
Superior Longitudinal Fasciculus (slf)
Protocol PDF Document (version 1.2): slf Instructions: Create two separate coronal seed regions (at approx. coronal slice 96), one on each side. Create one ROA region and draw a sagittal ROA slice at the midline In the region list, check only the … Continue reading
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354 Comments
Superior Fronto Occipital Fasciculus (sfo)
Protocol PDF Document (version 1.2): sfo Instructions: Create two separate coronal seed regions (at approx. coronal slice 75), one for each side. Create two separate coronal ROI regions (at approx. coronal slice 69), one for each side. Create one ROA region … Continue reading
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342 Comments
Superior Corona Radiata (scr)
Protocol PDF Document (version 1.2): scr Instructions: Create two separate axial seed regions (at approx. axial slice 99), one for each side. Create one ROA region and draw a sagittal ROA slice at the midline In the region list, check only the left … Continue reading
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2,248 Comments
Superior Cerebellar Peduncle (scp)
Protocol PDF Document (version 1.2): scp Instructions: Create two separate coronal seed regions (at approx. coronal slice 114), one for each side. Create two separate coronal ROI regions (at approx. coronal slice 104), one for each side. Then run fiber tracking. Based on … Continue reading
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782 Comments