Author Archives: Jasmine Greer

Fornix (crus)/ Stria Terminalis – fxst

Protocol PDF Document (version 1.2): fxst   Instructions: Create two separate coronal seed regions (at approx. coronal slice 111), one for each side. Create two separate coronal ROI regions (at approx. coronal slice 91), one for each side. Create an ROA region … Continue reading

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Fornix – fx

Protocol PDF Document (version 1.2): fx Instructions: Create two separate coronal seed regions (at approx. coronal slice 104), one for each side Create one coronal ROI regions (at approx. coronal slice 79), this will be used to generate the left fornix and … Continue reading

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Corticospinal Tract – cst

Protocol PDF Document (version 1.2): cst Instructions: Create two separate axial seed regions (at approx. axial slice 49), one for each side Create two separate axial ROI regions (at approx. axial slice 39), one for each side. Create one ROA region and draw … Continue reading

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Cerebral Peduncle – cp

Protocol PDF Document (version 1.2): cp   Instructions: Create two separate axial seed regions (at approx. axial slice 59): one for each side. Create an ROA region and draw a sagittal ROA slice at the midline (at approx. sagittal slice … Continue reading

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Cingulum (hippocampal part) – cgh

Protocol PDF Document (version 1.2): cgh Instructions: Create two separate coronal seed regions (at approx. coronal slice 107): one for each side Create four separate coronal ROI regions (at approx. coronal slice 116 and 122): two for each side. Create one ROA region … Continue reading

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Body of Corpus Callosum – bcc

Protocol PDF Document (version 1.2): bcc Instructions: At the midline, create one sagittal seed region (at approx. sagittal slice 78): the anterior extent lines up with the most posterior part of the genu, whereas the posterior extent lines up with … Continue reading

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Anterior Limb of the Internal Capsule – aic

Protocol PDF Document (version 1.2): aic Instructions: Create two separate coronal seed regions (at approx. coronal slice 71), one for each side. Create an ROA region and draw a sagittal ROA slice at the midline (at approx. sagittal slice 78). Check the … Continue reading

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Anterior Corona Radiata – acr

Protocol PDF Document (version 1.2): acr Instructions: Create two separate coronal ROI regions (at approx. coronal slice 48): one for the left side, one for the right side   Create two coronal seed regions (at approx. sagittal slice 57), one for … Continue reading

Posted in Protocol | 33 Comments