Big Data Category
Secondary use of radiological imaging data: Vanderbilt’s ImageVU approach
Dec. 4, 2025—David S. Smith, Karthik Ramadass, Laura Jones, Jennifer Morse, Daniel Fabbri, Joseph R. Coco, Shunxing Bao, Melissa Basford, Peter J. Embi, Reed A. Omary, John C. Gore, Jill M. Pulley, Bennett A. Landman. Secondary use of radiological imaging data: Vanderbilt’s ImageVU approach. J Biomed Inform. 2025 Oct;170:104905. doi: 10.1016/j.jbi.2025.104905. Epub 2025 Sep 10. PMID: 40939950....
Enhancing Clinical Data Management Through Barcode Integration and Research Electronic Data Capture: Scalable and Adaptable Implementation Study
Dec. 4, 2025—Rendong Zhang, Sophie Chiron, Regina Tyree, Kate S. Carson, Larry W. Raber, Karthik Ramadass, Chenyu Gao, Michael E. Kim, Lianrui Zuo, Yike Li, Zhiyu Wan, Paul A. Harris, Qi Liu, Ken S. Lau, Lori A. Coburn, Keith T. Wilson, Yuankai Huo, Bennett A. Landman, Shunxing Bao. Enhancing Clinical Data Management Through Barcode Integration and Research...
Scalable, reproducible, and cost-effective processing of large-scale medical imaging datasets
Apr. 13, 2025—Michael E. Kim, Karthik Ramadass, Chenyu Gao, Praitayini Kanakaraj, Nancy R. Newlin, Gaurav Rudravaram, Kurt G. Schilling, Blake E. Dewey, Derek Archer, Timothy J. Hohman, Zhiyuan Li, Shunxing Bao, Bennett A. Landman, and Nazirah Mohd Khairi. Scalable, reproducible, and cost-effective processing of large-scale medical imaging datasets. SPIE Medical Imaging: Imaging Informatics, 2025, February, San Diego,...
Nucleus subtype classification using inter-modality learning
Dec. 19, 2023—Lucas W. Remedios, Shunxing Bao, Samuel W. Remedios, Ho Hin Lee, Leon Y. Cai, Thomas Li, Ruining Deng, Can Cui, Jia Li, Qi Liu, Ken S. Lau, Joseph T. Roland, Mary K. Washington, Lori A. Coburn, Keith T. Wilson, Yuankai Huo, Bennett A. Landman (2024). Nucleus subtype classification using inter-modality learning. SPIE Medical Imaging 2024 :...
Exploring shared memory architectures for end-to-end gigapixel deep learning
Dec. 19, 2023—Lucas W. Remedios, Leon Y. Cai, Samuel W. Remedios, Karthik Ramadass, Aravind Krishnan, Ruining Deng, Can Cui, Shunxing Bao, Lori A. Coburn, Yuankai Huo, Bennett A. Landman (2023). Exploring shared memory architectures for end-to-end gigapixel deep learning. MIDL 2023 short paper track Full text: NIHMSID Abstract Deep learning has made great strides in medical imaging, enabled by hardware advances in GPUs. One major constraint for the development...
Predicting Age from White Matter Diffusivity with Residual Learning
Dec. 1, 2023—Chenyu Gao, Michael E. Kim, Ho Hin Lee, Qi Yang, Nazirah Mohd Khairi, Praitayini Kanakaraj, Nancy R. Newlin, Derek B. Archer, Angela L. Jefferson, Warren D. Taylor, Brian D. Boyd, Lori L. Beason-Held, Susan M. Resnick, The BIOCARD Study Team, Yuankai Huo, Katherine D. Van Schaik, Kurt G. Schilling, Daniel Moyer, Ivana Išgum, Bennett A....
Reproducibility evaluation of the effects of MRI defacing on brain segmentation
Nov. 10, 2023—Chenyu Gao, Bennett A. Landman, Jerry L. Prince, Aaron Carass. “Reproducibility evaluation of the effects of MRI defacing on brain segmentation”. J. Med. Imag. 10(6), 064001 (2023), https://doi.org/10.1117/1.JMI.10.6.064001, [PDF] Abstract Purpose Recent advances in magnetic resonance (MR) scanner quality and the rapidly improving nature of facial recognition software have necessitated the introduction of MR defacing...
Integrating the BIDS Neuroimaging Data Format and Workflow Optimization for Large-Scale Medical Image Analysis
Sep. 1, 2023—Shunxing Bao, Brian D Boyd, Praitayini Kanakaraj, Karthik Ramadass, Francisco A. C. Meyer, Yuqian Liu, William E. Duett, Yuankai Huo, Ilwoo Lyu, David H. Zald, Seth A. Smith, Baxter P. Rogers, Bennett A. Landman. Integrating the BIDS Neuroimaging Data Format and Workflow Optimization for Large-Scale Medical Image Analysis. Journal of Digital Imaging. 2022 Full Text Abstract...
Short superficial white matter and aging: a longitudinal multi-site study of 1293 subjects and 2711 sessions
Aug. 31, 2023—Kurt G Schilling, Derek Archer, Francois Rheault, Ilwoo Lyu, Yuankai Huo, Leon Y Cai, Silvia A Bunge, Kevin S Weiner, John C Gore, Adam W Anderson, Bennett A Landman Paper: https://pubmed.ncbi.nlm.nih.gov/36817413/ Abstract It is estimated that short association fibers running immediately beneath the cortex may make up as much as 60% of the total white matter...
Superficial white matter across development, young adulthood, and aging: volume, thickness, and relationship with cortical features
Aug. 31, 2023—Kurt G Schilling, Derek Archer, Francois Rheault, Ilwoo Lyu, Yuankai Huo, Leon Y Cai, Silvia A Bunge, Kevin S Weiner, John C Gore, Adam W Anderson, Bennett A Landman Paper: https://pubmed.ncbi.nlm.nih.gov/37074446 Abstract Superficial white matter (SWM) represents a significantly understudied part of the human brain, despite comprising a large portion of brain volume and making up...