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Image Segmentation Category

4D Multi-atlas Label Fusion using Longitudinal Images

Aug. 29, 2017—Yuankai Huo, Susan M. Resnick and Bennett A. Landman. “4D Multi-atlas Label Fusion using Longitudinal Images”. MICCAI Patch-MI Workshop, 2017. Full text: https://drive.google.com/open?id=0Bzzeqiij2Zara1ZlQXJiclM2UEE Abstract Longitudinal reproducibility is an essential concern in automated medical image segmentation, yet has proven to be an elusive objective as manual brain structure tracings have shown more than 10% variability. To improve reproducibility, longitudinal...

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Gray Matter Surface based Spatial Statistics (GS-BSS) in Diffusion Microstructure

Aug. 28, 2017—Citation: Gray Matter Surface based Spatial Statistics (GS-BSS) in Diffusion Microstructure. Authors: Prasanna Parvatheni, Baxter P. Rogers, Yuankai Huo, Kurt G. Schilling, Allison E. Hainline, Adam W. Anderson, Neil D. Woodward, Bennett A. Landman. International Conference on Medical Image Computing and Computer-Assisted Intervention. Springer. (2017). Accepted.  Abstract Tract-based spatial statistics (TBSS) has proven to be...

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Gray Matter Surface based Spatial Statistics in Neuroimaging Studies

Jun. 1, 2017—Citation: Gray Matter Surface based Spatial Statistics in Neuroimaging Studies. Authors: Prasanna Parvatheni, Baxter P. Rogers, Yuankai Huo, Kurt G. Schilling, Allison E. Hainline, Adam W. Anderson, Neil D. Woodward, Bennett A. Landman. Frontiers in Biomedical Imaging Science VI. May 2017. Abstract. Abstract In this study, we propose gray matter surface based spatial statistics (GS-BSS)...

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Accurate Age Estimation in a Pediatric Population Using Deep Learning on T1‐weighted MRI Structural Features

May. 15, 2017—Citation: Bermudez, C. et.al. Accurate Age Estimation in a Pediatric Population Using Deep Learning on T1‐weighted MRI  Structural Features. Frontiers in Biomedical Imaging Science VI. May 2017. Abstract. Abstrract It is well known that there are structural changes that occur in the brain with age. However, there are insufficient imaging biomarkers that reliably describe structural...

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Simultaneous total intracranial volume and posterior fossa volume estimation using multi‐atlas label fusion

Oct. 31, 2016—Yuankai Huo, Andrew J. Asman, Andrew J. Plassard, Bennett A. Landman. “Simultaneous total intracranial volume and posterior fossa volume estimation using multi‐atlas label fusion.” Human Brain Mapping. In Press October 2016 Full text: https://www.ncbi.nlm.nih.gov/pubmed/27726243 Abstract Total intracranial volume (TICV) is an essential covariate in brain volumetric analyses. The prevalent brain imaging software packages provide automatic TICV estimates. FreeSurfer and FSL estimate TICV using a scaling factor while SPM12 accumulates probabilities of...

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Investigation of Bias in Continuous Medical Image Label Fusion

Jun. 30, 2016—Fangxu Xing; Jerry Prince; Bennett Landman. Investigation of Bias in Continuous Medical Image Label Fusion. PLoS One. 2016 Jun 3;11(6):e0155862. PMC4892597 Full text: https://www.ncbi.nlm.nih.gov/pubmed/27258158 Abstract Image labeling is essential for analyzing morphometric features in medical imaging data. Labels can be obtained by either human interaction or automated segmentation algorithms, both of which suffer from errors....

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Consistent Cortical Reconstruction and Multi-atlas Brain Segmentation

Apr. 30, 2016—Yuankai Huo, Aaron Carass, Susan M. Resnick, Dzung L. Pham, Jerry L. Prince, Bennett A. Landman. “Consistent Cortical Reconstruction and Multi-atlas Brain Segmentation”. NeuroImage. Volume 138, September 2016, Pages 197–210 PMC4927397 Full text: https://www.ncbi.nlm.nih.gov/pubmed/27184203 Abstract Whole brain segmentation and cortical surface reconstruction are two essential techniques for investigating the human brain. Spatial inconsistences, which can...

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A 3D high resolution ex vivo white matter atlas of the common squirrel monkey (Saimiri sciureus) based on diffusion tensor imaging.

Feb. 27, 2016—Yurui Gao, Prasanna Parvathaneni, Kurt G. Schilling, Zhoubing Xu, Ann S. Choe, Bennett A. Landman, Adam M. Anderson. A 3D high resolution ex vivo white matter atlas of the common squirrel monkey (Saimiri sciureus) based on diffusion tensor imaging. In Proceedings of the SPIE Medical Imaging Conference. San Diego, California, February 2016. Full Text Abstract...

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Improving Cerebellar Segmentation with Statistical Fusion

Feb. 27, 2016—Andrew J. Plassard, Zhen Yang, Swati D. Rane, Jerry L. Prince, Daniel O. Claassen, Bennett A. Landman. “Improving Cerebellar Segmentation with Statistical Fusion. In Proceedings of the SPIE Medical Imaging Conference. San Diego, California, February 2016. Full Text: https://www.ncbi.nlm.nih.gov/pubmed/?term=Improving+Cerebellar+Segmentation+with+Statistical+Fusion Abstract The cerebellum is a somatotopically organized central component of the central nervous system well known...

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Structural Functional Associations of the Orbit in Thyroid Eye Disease: Kalman Filters to Track Extraocular Muscles

Feb. 10, 2016—Shikha Chaganti, Katrina Nelson, Kevin Mundy, Yifu Luo, Robert L. Harrigan, Steve Damon, Daniel Fabbri, Louise Mawn, Bennett Landman. “Structural Functional Associations of the Orbit in Thyroid Eye Disease: Kalman Filters to Track Extraocular Muscles”. In Proceedings of the SPIE Medical Imaging Conference. San Diego, California, February 2016. Oral presentation. Full text: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4845964/ Abstract Pathologies of...

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