Neuroimaging Category
Vanderbilt University Institute of Imaging Science Center for Computational Imaging XNAT: A multimodal data archive and processing environment
Jan. 31, 2016—Robert L. Harrigan, Benjamin C. Yvernault, Brian D. Boyd, Stephen M. Damon, Kyla David Gibney, Benjamin N. Conrad, Nicholas S. Phillips, Baxter P. Rogers, Yurui Gao, Bennett A. Landman “Vanderbilt University Institute of Imaging Science Center for Computational Imaging XNAT: A multimodal data archive and processing environment” Neuroimage, 2014. In press May 2015† Full Text:...
Multi-atlas Learner Fusion: An efficient segmentation approach for large-scale data
Dec. 26, 2015—Andrew J. Asman, Yuankai Huo, Andrew J. Plassard, and Bennett A. Landman, “Multi-atlas Learner Fusion: An efficient segmentation approach for large-scale data”, Medical Image Analysis (MedIA), 2015 Dec;26(1):82-91. Full text: http://linkinghub.elsevier.com/retrieve/pii/S1361-8415(15)00135-8 Abstract We propose multi-atlas learner fusion (MLF), a framework for rapidly and accurately replicating the highly accurate, yet computationally expensive, multi-atlas segmentation framework based on...
Data-driven Probabilistic Atlases Capture Whole-brain Individual Variation
Oct. 4, 2015—Yuankai Huo, Katherine Swett, Susan M. Resnick, Laurie E. Cutting, Bennett A. Landman. “Data-driven Probabilistic Atlases Capture Whole-brain Individual Variation”, MICCAI MAPPING Workshop, Munich, Germany, October 2015. Full text: https://www.researchgate.net/publication/303483865_Data-driven_Probabilistic_Atlases_Capture_Whole-brain_Individual_Variation Abstract
Integrating histology and MRI in the first digital brain atlas of the common squirrel monkey, Saimiri sciureus
Feb. 12, 2015—Peizhen Sun, Prasanna Parvathaneni, Yurui Gao, Kurt G. Schilling, Vaibhav A. Janve, Adam W. Anderson, Bennett A. Landman. “Integrating histology and MRI in the first digital brain atlas of the common squirrel monkey, Saimiri sciureus.” In Proceedings of the SPIE Medical Imaging Conference. Orlando, Florida, February 2015. † Full text: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4405811/ Abstract This effort is...
Revealing Latent Value of Clinically Acquired CTs of Traumatic Brain Injury Through Multi-Atlas Segmentation in a Retrospective Study of 1,003 with External Cross-Validation
Feb. 1, 2015—Andrew J. Plassard, Patrick D. Kelly, Andrew J. Asman, Hakmook Kang, Mayur B. Patel, Bennett A. Landman. “Revealing Latent Value of Clinically Acquired CTs of Traumatic Brain Injury Through Multi-Atlas Segmentation in a Retrospective Study of 1,003 with External Cross-Validation” In Proceedings of the SPIE Medical Imaging Conference. Orlando, Florida, February 2015. Full text: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4405676/...
Resource Estimation in High Performance Medical Image Computing
Oct. 31, 2014—Rueben Banalagay, Kelsie J. Covington, D.Mitch Wilkes, Bennett A. Landman. “Resource Estimation in High Performance Medical Image Computing.” Neuroinformatics. 2014 Oct;12(4):563-73. † PMC4381797 Full Text: https://www.ncbi.nlm.nih.gov/pubmed/24906466 Abstract Medical imaging analysis processes often involve the concatenation of many steps (e.g., multi-stage scripts) to integrate and realize advancements from image acquisition, image processing, and computational analysis. With the...
The impact of family structure and common environment on heritability estimation for neuroimaging genetics studies using SOLAR
Jun. 20, 2014—Mary Ellen Koran, Bo Li, Neda Jahanshad, Tricia A. Thornton-Wells, David C. Glahn, Paul M. Thompson, John Blangero, Thomas E. Nichols, Peter Kochunov, Bennett A. Landman, “The impact of family structure and common environment on heritability estimation for neuroimaging genetics studies using SOLAR”. Journal of Medical Imaging, 2014 Jun 27;1(1):014005 Full Text: https://www.ncbi.nlm.nih.gov/pubmed/25558465 Abstract Imaging...
Evaluation of Statistical Inference on Empirical Resting State fMRI.
May. 31, 2014—Xue Yang, Hakmook Kang, Allen T. Newton, Bennett A. Landman, “Evaluation of Statistical Inference on Empirical Resting State fMRI.” IEEE Transactions on Biomedical Engineering. IEEE Trans Biomed Eng. 2014 Apr;61(4):1091-9. PMC24658234† Full text: https://www.ncbi.nlm.nih.gov/pubmed/24658234 Abstract Modern statistical inference techniques may be able to improve the sensitivity and specificity of resting state functional magnetic resonance imaging...
A brain MRI atlas of the common squirrel monkey, Saimiri sciureus
Feb. 1, 2014—Yurui Gao, Shweta P. Khare, Swetasudha Panda, Ann S Choe, Iwona Stepniewska, Xia Li, Zhoahua Ding, Adam Anderson, Bennett A. Landman, “A brain MRI atlas of the common squirrel monkey, Saimiri sciureus.” In Proceedings of the SPIE Medical Imaging Conference. San Diego, California, February 2014. Oral Presentation. † Full Text: https://www.ncbi.nlm.nih.gov/pubmed/24817811 Abstract The common squirrel...
Out-of-Atlas Likelihood Estimation using Multi-Atlas Segmentation.
Apr. 15, 2013—Andrew J. Asman, Lola Chambless, Reid Thompson, and Bennett A. Landman. “Out-of-Atlas Likelihood Estimation using Multi-Atlas Segmentation.” Medical Physics. 2013 Apr;40(4) PMC23556928 † Full-Text: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3625241/ Abstract Purpose: Multi-atlas segmentation has been shown to be highly robust and accurate across an extraordinary range of potential applications. However, it is limited to the segmentation of structures...