Neuroimaging Category
Joint independent component analysis for hypothesizing spatiotemporal relationships between longitudinal gray and white matter changes in preclinical Alzheimer’s disease
Dec. 10, 2021—Leon Y. Cai, Francois Rheault, Cailey I. Kerley, Katherine S. Aboud, Lori L. Beason-Held, Andrea T. Shafer, Susan M. Resnick, Lori C. Jordan, Adam W. Anderson, Kurt G. Schilling, and Bennett A. Landman Abstract Characterizing relationships between gray matter (GM) and white matter (WM) in early Alzheimer’s disease (AD) would improve understanding of how and...
Multimodal neuroimaging in pediatric type 1 diabetes: a pilot multisite feasibility study of acquisition quality, motion, and variability
Dec. 10, 2021—Leon Y. Cai, Costin Tanase, Adam W. Anderson, Karthik Ramadass, Francois Rheault, Chelsea A. Lee, Niral J. Patel, Sky Jones, Lauren M. LeStourgeon, Alix Mahon, Sumit Pruthi, Kriti Gwal, Arzu Ozturk, Hakmook Kang, Nicole Glaser, Simona Ghetti, Sarah S. Jaser, Lori C. Jordan, and Bennett A. Landman Abstract Type 1 diabetes (T1D) affects over 200,000...
MASiVar: Multisite, Multiscanner, and Multisubject Acquisitions for Studying Variability in Diffusion Weighted Magnetic Resonance Imaging
Aug. 30, 2021—Leon Y. Cai, Qi Yang, Praitayini Kanakaraj, Vishwesh Nath, Allen T. Newton, Heidi A. Edmonson, Jeffrey Luci, Benjamin N. Conrad, Gavin R. Price, Colin B. Hansen, Cailey I. Kerley, Karthik Ramadass, Fang-Cheng Yeh, Hakmook Kang, Eleftherios Garyfallidis, Maxime Descoteaux, Francois Rheault, Kurt G. Schilling, and Bennett A. Landman. MASiVar: Multisite, Multiscanner, and Multisubject Acquisitions for...
Automated, open-source segmentation of the Hippocampus and amygdala with the open Vanderbilt archive of the temporal lobe
Aug. 28, 2021—Plassard, Andrew J., Shunxing Bao*, Maureen McHugo, Lori Beason-Held, Jennifer U. Blackford, Stephan Heckers, and Bennett A. Landman. “Automated, open-source segmentation of the Hippocampus and amygdala with the open Vanderbilt archive of the temporal lobe.” Magnetic Resonance Imaging 81 (2021): 17-23. Full text: https://www.sciencedirect.com/science/article/abs/pii/S0730725X21000692 Abstract Examining volumetric differences of the amygdala and anterior-posterior regions of the...
Technical Note: Comparison of Convolutional Neural Networks for Detecting Large Vessel Occlusion on Computed Tomography Angiography
Jul. 21, 2021—Lucas W. Remedios, Sneha Lingam, Samuel W. Remedios, Riqiang Gao, Stephen W. Clark, Larry T. Davis, Bennett A. Landman. Technical Note: Comparison of Convolutional Neural Networks for Detecting Large Vessel Occlusion on Computed Tomography Angiography. Medical Physics, 2021 Full Text Abstract Purpose: Artificial intelligence diagnosis and triage of large vessel occlusion may quicken clinical response for...
PreQual: An automated pipeline for integrated preprocessing and quality assurance of diffusion weighted MRI images
Jun. 23, 2021—Leon Y. Cai, Qi Yang, Colin B. Hansen, Vishwesh Nath, Karthik Ramadass, Graham W. Johnson, Benjamin N. Conrad, Brian D. Boyd, John P. Begnoche, Lori L. Beason-Held, Andrea T. Shafer, Susan M. Resnick, Warren D. Taylor, Gavin R. Price, Victoria L. Morgan, Baxter P. Rogers, Kurt G. Schilling, Bennett A. Landman. PreQual: An automated pipeline...
Generalizing deep whole-brain segmentation for post-contrast MRI with transfer learning
Dec. 26, 2020—Bermudez, C., Remedios, S. W., Ramadass, K., McHugo, M., Heckers, S., Huo, Y., & Landman, B. A. (2020). Generalizing deep whole-brain segmentation for post-contrast MRI with transfer learning. Journal of Medical Imaging, 7(6), 064004. Full Text: https://pubmed.ncbi.nlm.nih.gov/33381612/ Abstract Purpose: Generalizability is an important problem in deep neural networks, especially with variability of data acquisition in...
Challenges for biophysical modeling of microstructure
Dec. 9, 2020—Ileana O. Jelescu, Marco Palombo, Francesca Bagnato, Kurt G. Schilling. “Challenges for biophysical modeling of microstructure”. (2020) Journal of Neuroscience Methods 108861. Full text: https: https://www.sciencedirect.com/science/article/pii/S0165027020302843 Abstract The biophysical modeling efforts in diffusion MRI have grown considerably over the past 25 years. In this review, we dwell on the various challenges along the journey of...
Joint cortical surface and structural connectivity analysis of Alzheimer’s Disease
Nov. 20, 2020—Leon Y. Cai, Cailey I. Kerley, Chang Yu, Katherine S. Aboud, Lori L. Beason-Held, Andrea T. Shafer, Susan M. Resnick, Lori C. Jordan, Adam W. Anderson, Kurt G. Schilling, Ilwoo Lyu, Bennett A. Landman. Joint cortical surface and structural connectivity analysis of Alzheimer’s Disease. SPIE Medical Imaging, 2021. Full Text: NIHMSID Abstract Joint independent component...
Joint analysis of structural connectivity and cortical surface features: correlates with mild traumatic brain injury
Nov. 18, 2020—Cailey I. Kerley, Leon Y. Cai, Chang Yu, Logan M. Crawford, Jason M. Elenberger, Eden S. Singh, Kurt G. Schilling, Katherine S. Aboud, Bennett A. Landman, Tonia S. Rex, “Joint analysis of connectivity and cortical surface features: correlates with mild traumatic brain injury.” (2021, Feb) SPIE Medical Imaging. San Diego, CA. (Accepted) Full text: NIHMSID, arXiv...