Joint analysis of structural connectivity and cortical surface features: correlates with mild traumatic brain injury
Nov. 18, 2020—Cailey I. Kerley, Leon Y. Cai, Chang Yu, Logan M. Crawford, Jason M. Elenberger, Eden S. Singh, Kurt G. Schilling, Katherine S. Aboud, Bennett A. Landman, Tonia S. Rex, “Joint analysis of connectivity and cortical surface features: correlates with mild traumatic brain injury.” (2021, Feb) SPIE Medical Imaging. San Diego, CA. (Accepted) Full text: NIHMSID, arXiv...
Validation of group-wise registration for surface-based functional MRI analysis
Oct. 20, 2020—Chang Yu, Yue Liu, Leon Cai, Cailey Kerley, Kaiwen Xu, Katherine Aboud, Warren Taylor, Hakmook Kang, Andrea Shafer, Lori Beason-Held, Susan Resnick, Bennett Landman, Ilwoo Lyu. “Validation of group-wise registration for surface-based functional MRI analysis”. SPIE Medical Imaging 2021. [Full text][Code] Abstract Resting-state functional MRI (rsfMRI) provides important information for studying and mapping the activities...
Development and Characterization of a Chest CT Atlas
Oct. 13, 2020—Kaiwen Xu, Riqiang Gao, Mirza S. Khan, Shunxing Bao, Yucheng Tang, Steve A. Deppen, Yuankai Huo, Kim L. Sandler, Pierre P. Massion, Mattias P. Heinrich, Bennett A. Landman. Development and characterization of a chest CT atlas. SPIE Medical Imaging, 2021. Full text: https://arxiv.org/abs/2012.03124 Abstract A major goal of lung cancer screening is to identify individuals...
Brain connections derived from diffusion MRI tractography can be highly anatomically accurate – if we know where white matter pathways start, where they end, and where they don’t go
Aug. 25, 2020—Kurt G Schilling, Laurent Petit, Francois Rheault, Samuel Remedios, Carlo Pierpaoli, Adam W Anderson, Bennett A Landman, Maxime Descoteaux. “Brain connections derived from diffusion MRI tractography can be highly anatomically accurate – if we know where white matter pathways start, where they end, and where they don’t go”. Brain Struct Funct (2020). https://doi.org/10.1007/s00429-020-02129-z Full text: https://link.springer.com/article/10.1007/s00429-020-02129-z Abstract MR...
Histologically derived fiber response functions for diffusion MRI vary across white matter fibers – an ex vivo validation study in the squirrel monkey brain
Aug. 25, 2020—Kurt G Schilling, Yurui Gao, Iwona Stepniewska, Vaibhav Janve, Bennett A. Landman, Adam W. Anderson. “Histologically derived fiber response functions for diffusion MRI vary across white matter fibers – an ex vivo validation study in the squirrel monkey brain”. NMR in Biomedicine. 2019 Jun;32(6):e4090. doi: 10.1002/nbm.4090. Epub 2019 Mar 25. Full text: https://pubmed.ncbi.nlm.nih.gov/30908803/ Abstract Understanding the...
Distortion correction of diffusion weighted MRI without reverse phase-encoding scans or field-maps
Aug. 25, 2020—Kurt G Schilling*, Justin Blaber*, Colin Hansen, Leon Cai, Baxter Rogers, Adam W Anderson, Seth A Smith, Praitayini Kanakaraj, Tonia Rex, Susan M. Resnick, Andrea T. Shafer, Laurie Cutting, Neil Woodward, David Zald, Bennett A Landman.“ Distortion correction of diffusion weighted MRI without reverse phase-encoding scans or field-maps ”. PLoS ONE 15(7): e0236418. https://doi.org/10.1371/journal.pone.0236418 Full text: https:...
Automatic Labeling of Cortical Sulci using Convolutional Neural Networks in a Developmental Cohort
Apr. 20, 2020—Lingyan Hao, Shunxing Bao, Yucheng Tang, Riqiang Gao, Prasanna Parvathaneni, Jacob Miller, Willa Voorhies, Jewelia Yao, Silvia Bunge, Kevin Weiner, Bennett Landman, Ilwoo Lyu. “Automatic Labeling of Cortical Sulci using Convolutional Neural Networks in a Developmental Cohort”. IEEE International Symposium on Biomedical Imaging (ISBI) 2020, IEEE, 412-415, Iowa City, Iowa, USA, 2020. [Full text][Code] Abstract...
Validation and Optimization of Multi-Organ Segmentation on Clinical Imaging Archives
Feb. 12, 2020—Olivia Tang, Yuchen Xu, Yucheng Tang, Ho Hin Lee, Yunqiang Chen, Dashan Gao, Shizhong Han, Riqiang Gao, Michael R. Savona, Richard G. Abramson, Yuankai Huo, Bennett A. Landman, “Validation and Optimization of Multi-Organ Segmentation on Clinical Imaging Archives”, SPIE IP:MI 2020. Houston, TX. https://arxiv.org/abs/2002.04102 Abstract Segmentation of abdominal computed tomography (CT) provides spatial context, morphological...
Outlier Guided Optimization of Abdominal Segmentation
Feb. 12, 2020—Yuchen Xu*, Olivia Tang*, Yucheng Tang, Ho Hin Lee, Yunqiang Chen, Dashan Gao, Shizhong Han, Riqiang Gao, Michael R. Savona, Richard G. Abramson, Yuankai Huo, Bennett A. Landman, “Outlier Guided Optimization of Abdomen Segmentation”, SPIE IP:MI 2020. Houston, TX https://arxiv.org/abs/2002.04098 Abstract Abdominal multi-organ segmentation of computed tomography (CT) images has been the subject of extensive...
Enabling Multi-shell b-Value Generalizability of Data-Driven Diffusion Models with Deep SHORE
Jan. 17, 2020—Nath V, Lyu I, Schilling KG, Parvathaneni P, Hansen CB, Huo Y, Janve VA, Gao Y, Stepniewska I, Anderson AW, Landman BA. Enabling Multi-shell b-Value Generalizability of Data-Driven Diffusion Models with Deep SHORE. In International Conference on Medical Image Computing and Computer-Assisted Intervention 2019 Oct 13 (pp. 573-581). Springer, Cham. Full text: https://arxiv.org/ftp/arxiv/papers/1907/1907.06319.pdf Abstract Intra-voxel...